Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002186.1 Hibiscus syriacus cultivar Beakdansim tig00004454_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50539

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1488--1533
18
2.6
18
86
6
67
60
6
6
26
1.46
13433--13500
24
2.8
24
78
13
75
63
1
1
33
1.13
14350--14547
39
5.1
39
93
1
317
30
13
27
28
1.94
28363--28394
8
3.9
8
95
4
55
50
0
0
50
1.00
28363--28395
17
1.9
17
93
0
57
51
0
0
48
1.00
28362--28410
8
5.9
9
79
13
52
57
0
0
42
0.99
32233--32423
97
2.0
93
95
4
346
39
12
15
32
1.84
32529--32599
31
2.3
31
92
0
115
35
14
15
35
1.88
36979--37031
22
2.4
22
74
0
52
33
9
18
37
1.83
46395--46458
2
31.5
2
84
9
85
53
1
1
43
1.19
46391--46458
29
2.4
29
85
7
79
52
2
1
42
1.25

Tables:   1

The End!