Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002187.1 Hibiscus syriacus cultivar Beakdansim tig00004455_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70129

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
662--706
18
2.4
19
82
14
58
37
0
6
55
1.26
1159--1199
17
2.7
15
85
14
50
36
2
0
60
1.10
4940--4980
11
3.5
12
81
12
50
31
0
7
60
1.24
6339--6378
2
20.0
2
100
0
80
50
0
0
50
1.00
11065--11097
15
2.1
16
88
5
50
66
0
0
33
0.92
11247--11281
12
2.7
13
87
12
54
28
0
0
71
0.86
16934--17015
29
2.8
29
84
1
110
35
13
12
39
1.82
18183--18212
15
2.0
15
93
0
51
56
30
0
13
1.37
19814--19854
18
2.3
18
95
0
73
36
43
0
19
1.51
21587--21667
29
2.8
29
96
1
144
32
14
12
40
1.83
22053--22126
27
2.6
29
75
22
75
28
1
2
67
1.12
22791--23012
83
2.6
85
95
2
403
29
12
26
31
1.92
50712--50761
24
2.1
24
92
0
82
26
2
16
56
1.51
52858--52913
23
2.4
23
81
0
58
26
16
14
42
1.86
57177--57218
19
2.2
19
100
0
84
40
35
0
23
1.55
57147--57211
26
2.5
26
85
5
87
41
36
1
20
1.61
64097--64124
2
14.0
2
100
0
56
0
50
0
50
1.00
64242--64266
2
12.5
2
100
0
50
48
0
0
52
1.00
64425--64467
21
2.0
21
81
0
50
20
11
20
46
1.82
65514--65571
23
2.7
20
77
15
62
39
1
0
58
1.08

Tables:   1

The End!