Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002188.1 Hibiscus syriacus cultivar Beakdansim tig00004456_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75782

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9283--9332
27
1.9
27
92
8
86
48
10
12
30
1.73
11380--11540
79
2.1
77
94
4
279
45
6
17
30
1.74
20443--20504
23
2.7
23
87
0
88
54
1
0
43
1.09
20461--20495
11
3.1
11
84
8
52
68
0
0
31
0.90
21286--21368
2
41.5
2
92
0
139
46
0
0
53
1.00
37201--37266
24
2.8
24
95
0
114
15
31
15
37
1.88
37596--37699
33
3.2
33
95
0
181
20
24
38
17
1.93
37726--37751
12
2.2
12
100
0
52
42
23
26
7
1.81
38657--38683
5
5.4
5
100
0
54
59
22
0
18
1.38
41096--41239
72
2.0
72
100
0
288
40
18
23
18
1.91
42003--42032
15
1.9
15
93
6
51
63
0
0
36
0.95
42002--42041
20
2.0
20
85
9
55
62
0
2
35
1.09
53802--53873
20
3.3
20
67
25
56
62
1
1
34
1.13
53785--53873
46
2.0
46
93
4
155
60
1
2
35
1.16
62406--62430
2
12.5
2
100
0
50
52
0
0
48
1.00
65133--65173
20
2.0
21
95
4
75
39
2
4
53
1.35
66517--66546
13
2.2
14
94
5
53
46
0
6
46
1.29
66886--67018
66
2.0
66
100
0
266
43
4
10
41
1.59
71250--71286
20
1.9
19
89
10
58
45
10
24
18
1.81

Tables:   1

The End!