Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002195.1 Hibiscus syriacus cultivar Beakdansim tig00004473_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93778

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8999--9033
18
1.9
18
94
0
61
31
25
8
34
1.86
16276--16354
3
24.3
3
73
19
61
60
2
3
32
1.28
16276--16354
10
8.4
10
73
18
62
60
2
3
32
1.28
16276--16348
29
2.7
26
85
6
92
60
2
4
32
1.30
17526--17554
2
14.5
2
100
0
58
51
0
0
48
1.00
18721--18754
16
2.1
17
88
5
52
44
17
0
38
1.49
19361--19428
23
3.0
23
82
0
82
32
26
20
20
1.97
19394--19509
21
5.4
21
77
8
101
37
22
17
23
1.94
19417--19509
42
2.2
42
88
0
141
37
21
17
23
1.94
25363--25430
33
2.1
33
91
0
109
14
33
20
30
1.93
26488--26542
2
27.5
2
100
0
110
49
0
0
50
1.00
26619--26657
18
2.2
18
90
0
60
41
2
10
46
1.51
37242--37269
12
2.3
12
100
0
56
92
0
7
0
0.37
37208--37330
65
1.9
65
88
3
185
56
11
21
11
1.66
38089--38897
105
7.7
105
95
0
1376
33
26
18
21
1.97
39179--39246
33
2.1
33
88
0
100
14
32
20
32
1.93
40297--40327
2
15.5
2
100
0
62
48
0
0
51
1.00
43318--43376
24
2.4
25
88
8
86
27
27
27
18
1.98
44044--44086
21
2.0
21
86
0
59
16
25
27
30
1.97
44542--44617
3
25.0
3
97
2
143
65
0
34
0
0.93
46944--47099
64
2.4
64
82
6
165
33
20
19
26
1.97
47724--47784
23
2.7
23
84
0
86
19
26
26
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54363--54407
23
2.0
23
86
0
63
20
26
26
26
1.99
58783--58824
22
1.9
22
85
0
57
33
26
19
21
1.97
60963--61034
2
36.0
2
100
0
144
50
0
0
50
1.00
64870--64999
66
2.0
64
96
3
242
29
24
23
23
1.99
68211--68606
199
2.0
195
98
1
756
34
13
18
32
1.90
73608--73654
2
23.5
2
100
0
94
51
0
0
48
1.00
82217--82258
22
1.9
22
85
9
59
38
0
33
28
1.58
82878--83002
55
2.3
55
94
0
214
27
20
23
28
1.99
83814--83862
18
2.7
18
93
0
80
18
22
32
26
1.97
85975--86069
22
4.3
22
87
4
129
24
12
27
35
1.91
85975--86069
44
2.1
45
90
5
149
24
12
27
35
1.91
89007--89100
2
47.0
2
95
0
170
47
0
2
50
1.13
93601--93627
6
4.5
6
100
0
54
51
33
0
14
1.43

Tables:   1

The End!