Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000220.1 Hibiscus syriacus cultivar Beakdansim tig00000389_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62828

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2926--2954
3
10.0
3
92
7
51
65
0
0
34
0.93
21421--21447
7
3.9
7
100
0
54
88
0
11
0
0.50
22267--22990
44
16.4
44
68
8
351
29
20
20
28
1.98
22262--22990
133
5.5
133
90
4
1139
29
20
20
29
1.98
24121--24190
21
3.3
22
68
11
56
25
4
5
64
1.34
29072--29114
14
3.1
14
74
12
52
37
0
4
58
1.19
30356--30385
14
2.1
14
100
0
60
23
20
6
50
1.71
32936--32980
19
2.4
19
88
0
72
46
13
4
35
1.63
33201--33284
36
2.3
38
85
4
109
54
2
2
40
1.26
35093--35125
3
11.0
3
93
0
57
0
36
0
63
0.95
40048--40077
13
2.3
13
94
0
51
40
33
16
10
1.82
41512--41871
91
4.0
89
87
5
497
25
21
15
38
1.92
50959--50988
15
2.1
15
93
6
53
20
20
33
26
1.97
53933--53995
19
3.5
17
77
14
54
69
4
1
23
1.16
55149--55189
21
2.0
20
85
4
55
58
0
9
31
1.31
55394--55448
29
1.9
30
82
10
71
47
3
0
49
1.19

Tables:   1

The End!