Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002214.1 Hibiscus syriacus cultivar Beakdansim tig00004508_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77383

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6664--6785
60
2.0
60
90
0
190
31
22
13
31
1.93
7427--7491
27
2.4
27
84
0
85
47
6
4
41
1.49
7444--7496
27
2.0
27
96
0
97
45
3
3
47
1.39
17315--17387
35
2.1
35
94
0
128
39
2
2
54
1.29
24464--24489
13
2.0
13
100
0
52
53
15
0
30
1.42
26540--26567
2
14.0
2
100
0
56
50
0
0
50
1.00
49691--50077
6
64.5
6
98
0
414
23
3
26
47
1.67
63963--64009
20
2.4
20
96
3
87
55
10
10
23
1.65
69249--69375
41
3.1
41
75
13
134
30
18
21
29
1.97
69102--69379
83
3.4
81
77
8
276
32
15
20
30
1.94
69803--69851
22
2.2
22
85
0
62
40
10
10
38
1.73
73387--73423
18
2.1
18
89
0
56
29
8
18
43
1.79
74765--74795
14
2.3
14
94
5
55
35
25
3
35
1.72
75281--75354
24
3.2
24
87
7
102
24
25
18
31
1.98

Tables:   1

The End!