Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002215.1 Hibiscus syriacus cultivar Beakdansim tig00004509_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63714

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
126--234
55
2.0
55
98
0
209
46
7
8
37
1.62
3531--3823
117
2.6
112
87
8
393
24
21
14
39
1.91
5170--5211
18
2.3
18
91
4
66
7
9
0
83
0.81
5181--5231
8
6.0
8
77
18
50
1
9
1
86
0.73
5181--5231
9
5.8
9
80
11
61
1
9
1
86
0.73
5176--5228
14
3.9
14
83
14
65
3
9
1
84
0.81
19609--19635
7
3.9
7
100
0
54
29
40
14
14
1.86
21409--21464
27
2.0
29
83
13
73
35
5
5
53
1.47
25608--25648
8
5.2
8
82
5
57
34
0
29
36
1.58
25681--25712
12
2.4
14
90
10
50
40
3
12
43
1.58
25729--26079
128
2.7
127
93
0
594
21
23
21
34
1.97
26498--26555
28
2.1
27
84
12
73
36
1
0
62
1.06
26475--26581
34
3.1
34
82
0
124
36
2
4
56
1.35
27108--27168
21
2.9
21
92
0
86
24
21
34
19
1.96
27447--27485
17
2.4
17
95
4
71
43
0
5
51
1.24
27743--27783
21
2.0
21
85
4
57
21
9
41
26
1.84
29302--29366
27
2.4
27
82
5
69
58
4
0
36
1.19
29318--29371
17
3.2
17
78
2
56
59
3
0
37
1.15
29519--29603
32
2.6
32
81
5
89
57
2
0
40
1.11
29519--29594
32
2.3
35
81
6
95
59
1
0
39
1.06
29553--29590
15
2.5
15
83
12
51
60
0
0
39
0.97
29547--29624
34
2.3
34
80
10
88
64
3
0
32
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33012--33181
84
2.0
83
93
3
288
32
11
18
37
1.87
37593--37623
15
2.1
15
100
0
62
54
6
19
19
1.65
38291--38349
24
2.5
24
94
0
100
28
20
15
35
1.93
38715--38754
13
3.2
13
82
10
57
0
35
0
65
0.93
39013--39043
15
2.1
15
93
0
53
32
22
12
32
1.92
50448--50486
16
2.4
16
86
4
51
33
0
5
61
1.18
51012--51049
16
2.4
16
90
0
58
23
31
15
28
1.96

Tables:   1

The End!