Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002226.1 Hibiscus syriacus cultivar Beakdansim tig00004531_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67429

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
174--895
56
11.7
64
69
18
440
29
19
17
33
1.95
237--325
29
3.1
28
76
12
74
34
15
16
32
1.91
256--339
27
3.0
27
77
6
105
30
14
19
35
1.91
175--908
123
6.0
123
84
4
921
29
19
17
32
1.95
373--463
27
3.3
27
72
6
83
30
13
19
36
1.90
482--571
29
3.2
29
73
17
98
32
20
16
31
1.95
496--581
27
3.1
26
70
18
75
31
17
17
33
1.93
925--1215
134
2.2
135
83
5
383
34
18
18
28
1.94
1497--1536
3
13.7
3
85
15
57
35
0
0
65
0.93
1496--1536
13
3.1
14
89
10
68
36
0
0
63
0.95
1497--1536
16
2.5
16
92
8
64
35
0
0
65
0.93
1497--1545
16
3.1
15
80
11
53
32
2
0
65
1.04
6469--6522
23
2.3
23
80
0
63
59
5
1
33
1.31
7644--7697
22
2.5
22
75
6
56
57
0
1
40
1.09
7675--7728
30
1.9
30
85
11
78
66
3
0
29
1.09
8046--8570
113
4.7
114
83
5
644
29
18
13
38
1.89
8052--8608
222
2.5
222
82
4
656
29
17
14
38
1.89
16839--16923
43
2.0
44
88
2
127
31
24
11
31
1.91
18864--18921
28
2.1
28
81
12
66
67
1
0
31
1.01
20884--20936
3
19.0
3
81
14
60
66
1
0
32
1.03
20884--20939
19
3.0
18
79
7
67
66
1
0
32
1.03
20862--20940
22
3.8
21
77
14
74
62
1
0
36
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20887--20962
19
4.1
18
79
12
66
67
3
1
27
1.17
30732--30816
43
2.0
44
88
2
127
31
24
11
31
1.91
32760--32819
29
2.1
28
81
12
68
65
1
0
33
1.03
34785--34837
3
19.0
3
81
14
60
66
1
0
32
1.03
34785--34840
19
3.0
18
79
7
67
66
1
0
32
1.03
34763--34841
22
3.8
21
77
14
74
62
1
0
36
1.04
34788--34863
19
4.1
18
79
12
66
67
3
1
27
1.17
48588--48645
23
2.7
21
81
5
62
22
25
27
24
2.00
48592--48645
21
2.4
23
78
6
58
24
25
25
24
2.00
57174--57222
14
3.6
14
75
2
55
34
24
24
16
1.95
57258--57318
9
6.2
10
79
11
56
31
29
21
18
1.96
57272--57317
9
4.7
10
84
10
60
36
30
19
13
1.90
65875--65960
27
3.2
27
77
9
88
29
16
22
32
1.95
65995--66083
29
3.2
28
77
9
83
30
22
20
26
1.98
65879--66269
120
3.3
122
87
5
559
27
21
18
32
1.97
66132--66215
27
3.1
27
72
11
82
27
16
17
38
1.92
66159--66318
65
2.5
65
89
2
241
25
23
15
36
1.94
66342--66633
131
2.2
129
81
4
345
32
18
17
31
1.94
66342--66653
133
2.4
129
77
4
313
31
19
17
31
1.95
66908--66953
3
16.0
3
91
8
78
34
0
0
65
0.93
66916--66950
17
2.1
17
100
0
70
34
0
0
65
0.93
66908--66959
20
2.6
20
96
0
95
32
1
0
65
1.04

Tables:   1

The End!