Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002231.1 Hibiscus syriacus cultivar Beakdansim tig00004538_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29469

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5749--5807
20
2.8
20
79
5
73
25
32
25
16
1.97
10105--10230
37
3.4
37
83
0
153
39
15
19
24
1.91
10282--10815
111
4.8
110
79
6
531
29
20
19
30
1.97
10241--10760
55
9.4
55
76
6
440
30
20
19
30
1.97
10397--10807
221
1.9
221
83
2
538
29
21
20
28
1.98
12143--12253
2
55.5
2
98
0
213
49
0
0
49
1.07
12700--12765
23
2.9
23
88
0
87
25
22
28
22
1.99
13430--13472
21
2.0
21
81
0
50
16
25
30
27
1.97
18319--18348
16
1.9
16
93
6
53
46
6
0
46
1.29
18321--18366
17
2.8
16
83
3
56
47
6
0
45
1.28
18485--18547
23
2.7
23
80
5
63
46
1
1
50
1.20
18604--18669
17
3.7
17
76
9
60
42
3
0
54
1.15
18613--18670
12
4.7
13
70
20
52
41
1
0
56
1.09
18870--18989
42
2.9
42
94
0
213
45
19
18
17
1.86
19517--19569
22
2.4
22
90
3
79
28
18
18
33
1.95
22247--22320
31
2.4
31
81
2
96
45
14
14
24
1.83

Tables:   1

The End!