Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002232.1 Hibiscus syriacus cultivar Beakdansim tig00004539_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49799

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8617--8702
23
3.9
23
80
14
92
24
16
23
36
1.94
8646--8684
19
2.1
19
100
0
78
25
15
23
35
1.94
8848--8872
10
2.5
10
100
0
50
48
20
16
16
1.82
10458--10520
11
5.9
11
69
14
51
38
1
3
57
1.24
10653--10711
23
2.6
23
91
5
93
27
13
20
38
1.90
11385--11418
18
2.0
18
88
11
54
35
0
0
64
0.94
14461--14527
21
3.2
21
76
2
55
25
20
19
34
1.96
14489--14533
20
2.2
21
88
4
65
31
24
17
26
1.97
14930--14975
19
2.3
20
92
3
76
10
17
19
52
1.74
17540--17572
11
3.0
11
91
8
50
18
3
0
78
0.87
20255--20297
14
3.0
15
83
10
54
16
0
6
76
0.99
22595--22644
24
2.1
24
85
7
66
28
2
12
58
1.45
24249--24341
42
2.2
42
82
3
116
19
34
22
23
1.96
24249--24341
21
4.4
21
77
0
96
19
34
22
23
1.96
25691--25723
13
2.4
14
90
5
50
33
0
18
48
1.48
25702--25837
64
2.1
63
87
1
191
28
2
16
52
1.56
25759--25816
27
2.1
27
81
6
64
29
1
17
51
1.55
25937--25971
14
2.6
14
86
4
54
8
22
25
42
1.82
25937--25979
14
3.1
14
80
6
52
11
20
23
44
1.84
25973--26028
29
1.9
29
96
0
103
32
23
16
28
1.96
27393--27429
18
2.1
18
89
0
56
51
10
5
32
1.60
27815--27864
25
2.0
25
92
0
82
46
20
8
26
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28191--28226
18
2.0
18
94
0
63
19
2
22
55
1.56
30495--30548
24
2.2
24
93
0
90
40
20
18
20
1.91
31302--31340
16
2.6
15
84
11
53
66
0
5
28
1.12
31478--31565
20
4.5
19
79
12
72
34
12
22
30
1.91
31497--31615
41
2.9
41
83
6
143
29
10
23
36
1.89
31518--31590
20
3.7
18
77
15
65
30
12
23
34
1.91
31601--31657
21
2.7
21
94
0
96
38
15
22
22
1.92
37256--37332
3
25.0
3
79
12
77
38
0
1
59
1.06
37257--37339
16
5.3
15
75
15
62
40
0
1
57
1.06
47652--47690
16
2.6
14
84
15
51
35
2
0
61
1.10
47665--47710
24
1.9
24
86
0
65
28
2
2
67
1.14
47690--47726
16
2.4
16
86
13
51
27
2
5
64
1.28
47643--47739
41
2.4
40
83
11
126
29
2
3
64
1.20

Tables:   1

The End!