Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002233.1 Hibiscus syriacus cultivar Beakdansim tig00004543_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69052

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
251--287
19
1.9
19
89
10
58
16
2
0
81
0.81
6216--6240
12
2.1
12
100
0
50
36
0
40
24
1.55
9940--9974
14
2.5
14
80
0
52
45
2
17
34
1.63
12210--12240
2
15.5
2
100
0
62
51
0
0
48
1.00
15560--15613
17
3.2
16
79
10
56
5
12
1
79
0.98
15565--15615
21
2.4
21
86
0
66
3
11
1
82
0.89
27559--27592
17
2.0
17
88
11
52
8
8
0
82
0.85
27564--27611
23
2.1
22
92
3
78
6
6
2
85
0.81
32075--32099
12
2.1
12
100
0
50
36
0
40
24
1.55
39036--39091
4
13.5
4
88
7
78
0
21
1
76
0.87
49515--49561
17
2.8
17
83
6
60
19
25
19
36
1.95
56320--56371
24
2.1
26
85
7
72
19
17
19
44
1.87
56320--56370
25
2.1
24
85
3
66
19
17
19
43
1.89
62018--62109
48
1.9
48
86
0
130
20
14
15
50
1.78
62016--62085
24
2.9
25
85
4
90
21
17
15
45
1.85
62015--62109
24
4.0
24
78
5
84
21
13
15
49
1.79
62267--62343
2
38.5
2
97
0
145
49
1
0
49
1.09
65080--65140
29
2.1
28
82
8
70
55
4
14
24
1.59
65269--65307
14
2.7
14
88
4
60
43
2
20
33
1.65

Tables:   1

The End!