Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002238.1 Hibiscus syriacus cultivar Beakdansim tig00004552_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67401

Tables:   1   

This is table  1  of  1  ( 55 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
193--307
43
2.7
43
78
6
144
28
11
20
40
1.87
1876--1927
25
2.1
24
82
3
59
42
13
26
17
1.86
3281--3314
9
3.9
9
84
7
52
35
0
2
61
1.11
3280--3318
17
2.4
17
95
4
71
33
0
5
61
1.18
3806--3831
12
2.2
12
100
0
52
34
0
15
50
1.45
4070--4112
21
2.0
21
86
0
59
30
27
25
16
1.97
5489--5706
103
2.1
103
94
0
382
26
13
22
37
1.92
5723--5790
23
3.0
23
88
0
91
20
25
26
27
1.99
9323--9365
21
2.0
21
86
0
59
32
25
23
18
1.97
10726--10943
103
2.1
103
96
0
400
25
13
23
37
1.92
10960--11027
23
3.0
23
86
0
91
20
26
26
26
1.99
14057--14119
25
2.5
25
100
0
126
17
4
17
60
1.53
14055--14125
12
5.8
12
78
6
79
16
4
16
61
1.49
17580--17625
16
2.7
18
78
18
53
65
4
2
28
1.23
18751--18827
6
12.8
6
81
0
73
15
3
68
11
1.33
18754--18824
21
3.4
21
86
0
88
16
4
69
9
1.33
24555--24614
15
3.9
15
74
8
66
21
25
31
21
1.98
24543--24611
32
2.2
32
89
0
102
20
26
31
21
1.98
25055--25122
3
23.0
3
75
8
50
41
1
0
57
1.08
25064--25122
17
3.4
18
77
13
61
42
1
0
55
1.09
25812--25939
36
3.5
36
77
9
107
39
4
9
46
1.57
25875--26076
37
5.5
37
86
8
279
43
4
7
44
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26041--26140
31
3.2
30
87
7
128
42
4
6
48
1.46
26208--26237
6
4.8
6
92
8
51
30
0
0
70
0.88
26208--26247
13
3.2
13
89
10
57
30
0
0
70
0.88
26227--26256
3
9.7
3
92
7
51
30
0
0
70
0.88
26207--26253
19
2.6
18
81
18
53
29
0
0
70
0.88
30378--30637
100
2.6
98
87
3
380
31
19
18
30
1.96
31763--33325
84
18.7
84
84
2
1805
32
24
19
23
1.97
34003--34191
37
5.2
35
86
9
245
44
4
6
43
1.52
34156--34255
31
3.2
30
88
7
137
42
3
7
48
1.45
34156--34255
30
3.2
31
88
7
132
42
3
7
48
1.45
34217--34323
42
2.7
38
84
10
124
42
3
4
48
1.41
34322--34350
6
4.8
6
100
0
58
31
0
0
68
0.89
34320--34361
18
2.3
18
84
8
59
28
0
0
71
0.86
34865--34919
22
2.5
22
91
5
85
20
27
27
25
1.99
34908--34957
18
2.8
18
93
0
82
20
22
32
26
1.98
39750--39871
22
5.5
22
89
0
190
13
25
30
30
1.94
41268--41343
20
3.7
20
78
15
73
25
18
31
25
1.97
41288--41345
22
2.8
21
84
12
75
24
18
31
25
1.98
41268--41343
21
3.7
19
80
15
71
25
18
31
25
1.97
41305--41496
75
2.5
75
93
2
314
25
20
25
29
1.99
41713--41770
30
2.0
29
90
10
91
44
17
5
32
1.70
41713--41772
29
2.0
30
93
6
104
43
16
6
33
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42277--42302
2
13.0
2
100
0
52
50
0
0
50
1.00
46042--46075
17
2.1
16
88
5
50
14
8
0
76
1.01
55176--55209
17
2.1
16
88
5
50
14
8
0
76
1.01
58901--58962
10
6.1
10
78
14
65
77
0
19
3
0.90
58902--58961
31
2.0
30
87
9
86
76
0
20
3
0.92
61712--62547
265
3.2
265
86
4
1188
30
17
19
32
1.95
62232--62327
42
2.3
42
87
1
131
22
23
22
30
1.99
63093--63141
3
17.0
3
87
8
75
32
0
0
67
0.91
63168--63218
20
2.3
21
83
16
68
33
33
21
11
1.90
64421--64473
13
4.0
14
78
11
58
24
1
0
73
0.93
64696--64724
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!