Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002250.1 Hibiscus syriacus cultivar Beakdansim tig00004572_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91704

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
346--384
20
2.0
20
90
10
62
30
20
25
23
1.98
6026--6080
21
2.8
20
81
13
60
49
3
0
47
1.19
19137--19269
45
3.0
45
93
0
221
28
25
12
33
1.93
32709--32769
2
30.5
2
100
0
122
50
0
0
49
1.00
38172--38209
17
2.2
17
86
9
51
65
5
5
23
1.34
64864--64908
22
2.0
22
100
0
90
64
4
4
26
1.32
66104--66145
18
2.3
18
87
0
66
47
0
33
19
1.49
69566--69597
16
1.9
17
93
6
57
28
0
25
46
1.53
71482--71517
2
18.0
2
100
0
72
50
0
0
50
1.00
71956--72017
30
2.1
30
93
0
106
24
14
22
38
1.91
72015--72078
22
2.9
21
86
9
83
26
18
25
29
1.98
75363--75431
23
3.0
23
89
0
111
31
26
24
17
1.97
84193--84217
12
2.1
12
100
0
50
32
0
0
68
0.90

Tables:   1

The End!