Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002255.1 Hibiscus syriacus cultivar Beakdansim tig00004585_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57567

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4097--4140
2
23.5
2
86
13
67
47
0
0
52
1.00
6437--6525
44
2.0
47
84
6
121
38
12
19
30
1.88
10399--10560
29
5.7
29
82
8
188
48
18
3
29
1.65
10399--10561
57
2.9
57
84
7
222
47
18
3
30
1.65
15036--15115
39
2.0
40
87
2
117
26
17
21
35
1.95
15036--15135
20
5.1
20
86
2
121
24
17
22
37
1.94
15653--15705
23
2.2
25
83
6
65
41
0
3
54
1.18
16701--16727
2
13.5
2
100
0
54
48
0
0
51
1.00
28678--28757
30
2.7
30
80
7
92
48
10
12
28
1.73
28828--28897
31
2.3
30
85
7
88
57
7
4
31
1.45
36438--36561
61
2.0
61
89
3
187
40
11
12
35
1.80
37480--37520
2
20.5
2
94
0
73
0
51
0
48
1.00
37520--37555
2
18.0
2
100
0
72
50
0
0
50
1.00
45097--45217
61
2.0
60
88
3
172
40
11
13
34
1.80
46138--46178
2
20.5
2
94
0
73
0
51
0
48
1.00
46178--46217
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1

The End!