Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002260.1 Hibiscus syriacus cultivar Beakdansim tig00004594_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44258

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4821--4859
20
1.9
21
94
5
71
46
25
15
12
1.81
4908--6125
198
6.1
199
86
2
1653
42
15
14
28
1.85
4907--6125
397
3.1
397
92
1
1942
42
15
14
28
1.85
7836--8507
197
3.4
194
79
9
696
40
14
14
30
1.86
8518--8562
23
2.0
23
95
0
81
37
20
8
33
1.83
11140--11232
32
2.9
32
77
15
93
20
22
35
21
1.96
11149--11264
32
3.7
30
73
15
90
21
23
34
20
1.97
11419--11444
5
5.2
5
100
0
52
80
0
0
19
0.71
12411--12495
31
2.7
32
76
7
93
35
29
14
21
1.92
13416--13463
22
2.2
22
84
0
60
39
4
18
37
1.70
14283--14346
22
3.0
21
79
9
76
29
21
21
26
1.99
14304--14345
21
2.0
21
86
4
59
30
23
21
23
1.99
20962--21005
18
2.4
18
100
0
88
56
6
22
13
1.61
39683--39745
33
1.9
33
96
0
117
31
22
17
28
1.96

Tables:   1

The End!