Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002262.1 Hibiscus syriacus cultivar Beakdansim tig00004602_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46317

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
740--817
26
3.1
26
73
10
72
33
14
3
48
1.61
781--836
24
2.3
24
78
6
60
32
14
5
48
1.66
3478--3530
25
2.1
25
92
0
88
18
22
26
32
1.97
3805--3830
13
2.0
13
100
0
52
23
0
0
76
0.78
34035--34093
14
4.2
14
91
0
82
45
8
11
33
1.71
34028--34093
28
2.4
28
86
0
87
48
7
12
31
1.68
34314--34382
22
3.2
20
73
16
59
47
1
1
49
1.19
34278--34439
75
2.1
75
78
13
163
52
0
1
45
1.13
34323--34432
41
2.7
42
76
6
111
52
0
0
45
1.13
34396--34433
15
2.7
14
84
8
51
60
0
0
39
0.97
34504--34592
21
4.4
21
68
13
53
47
1
1
50
1.15
34568--34628
23
2.6
23
79
7
61
50
0
0
49
1.00
35395--35422
14
2.0
14
100
0
56
42
7
14
35
1.73
40493--40591
50
1.9
52
87
4
148
43
14
3
39
1.60
45022--45381
154
2.4
154
86
2
485
30
18
5
45
1.73
45022--45406
152
2.5
154
85
3
483
29
18
5
45
1.73
45738--45770
14
2.4
14
89
0
57
39
30
9
21
1.84
45766--45966
85
2.4
85
94
0
350
39
19
11
29
1.86

Tables:   1

The End!