Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000227.1 Hibiscus syriacus cultivar Beakdansim tig00000397_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49827

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3842--3882
17
2.3
19
83
8
50
56
19
4
19
1.60
4787--4834
14
3.3
14
79
5
51
66
25
4
4
1.27
5405--5445
2
20.5
2
100
0
82
48
0
0
51
1.00
17008--17899
445
2.0
445
96
0
1649
34
20
16
29
1.94
22652--22807
53
2.9
53
86
5
208
21
26
22
28
1.99
23141--23324
93
2.0
93
91
2
298
27
18
19
34
1.95
29545--29580
6
6.0
6
86
0
54
50
16
16
16
1.79
41691--41729
2
19.5
2
100
0
78
48
0
0
51
1.00
44209--44276
30
2.3
30
84
0
82
42
10
42
4
1.58
44282--44327
24
1.9
24
86
0
65
19
21
39
19
1.93
48762--48883
44
2.8
44
98
0
235
37
22
12
27
1.90

Tables:   1

The End!