Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002274.1 Hibiscus syriacus cultivar Beakdansim tig00004623_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77337

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8976--9002
11
2.5
11
100
0
54
92
0
7
0
0.38
15025--15064
21
1.9
21
89
0
62
25
40
25
10
1.86
17300--17438
66
2.1
66
97
0
260
43
5
21
29
1.76
18865--19225
135
2.7
136
87
0
517
31
22
14
31
1.94
19411--19471
3
20.0
3
77
9
52
32
1
1
63
1.13
19527--19569
23
1.9
23
95
4
79
44
37
13
4
1.65
21303--21658
130
2.7
131
88
2
520
32
11
16
39
1.84
25143--25180
19
2.1
19
90
5
60
28
36
21
13
1.91
29134--29165
3
10.7
3
100
0
64
31
0
0
68
0.90
33636--33677
14
3.2
13
80
9
50
16
14
7
61
1.53
36600--36936
54
6.2
54
90
0
505
29
20
16
33
1.95
49175--49223
20
2.5
20
87
12
66
24
28
12
34
1.91
54153--54516
54
6.8
54
84
1
435
31
19
14
34
1.92
54170--54516
108
3.2
106
86
2
480
31
19
15
34
1.93
54136--54516
162
2.4
160
84
2
485
31
19
14
34
1.92
56977--57348
134
2.8
133
82
3
424
32
20
14
31
1.93
57325--57368
20
2.2
20
95
0
79
18
22
6
52
1.69
57353--57629
132
2.1
132
81
5
319
33
19
15
30
1.94
57806--57856
3
17.0
3
100
0
102
33
0
0
66
0.92
60796--60854
28
2.1
28
84
6
75
27
8
6
57
1.53
63722--63752
16
1.9
16
100
0
62
12
25
22
38
1.90
66623--66648
5
5.2
5
100
0
52
80
0
0
19
0.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67418--67473
29
1.9
29
96
0
103
39
7
8
44
1.63
67418--67481
29
2.2
29
91
0
101
35
7
7
48
1.61
68308--68550
131
1.9
131
85
3
337
32
10
13
43
1.77
70021--70058
2
19.0
2
100
0
76
50
0
0
50
1.00
70790--70865
36
2.1
35
83
11
91
50
0
2
47
1.15

Tables:   1

The End!