Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002287.1 Hibiscus syriacus cultivar Beakdansim tig00004652_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74101

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1116--1785
195
3.4
195
85
6
822
37
14
15
31
1.89
18975--19015
3
13.7
3
100
0
82
0
31
0
68
0.90
24873--24972
35
2.7
35
84
6
110
39
15
15
31
1.87
25524--25557
17
2.1
16
88
5
50
26
8
0
64
1.22
27673--27712
18
2.2
18
100
0
80
20
32
12
35
1.90
29449--29492
8
5.6
8
83
5
54
81
2
15
0
0.78
29440--29506
16
4.5
14
75
17
55
77
5
16
0
0.95
29440--29505
15
4.4
15
77
5
62
78
6
15
0
0.93
30136--30184
22
2.2
22
96
0
89
36
24
12
26
1.91
30581--30616
18
2.0
18
94
0
63
16
8
33
41
1.78
31098--31343
36
7.0
36
78
12
217
28
20
11
39
1.87
31182--31336
36
4.2
36
92
2
247
25
20
11
42
1.86
31098--31479
173
2.2
175
84
1
482
27
20
12
39
1.88
31358--31479
36
3.4
36
85
3
165
24
21
14
39
1.91
32151--33544
105
13.3
104
83
6
1393
32
25
20
21
1.97
34009--34079
35
2.0
37
88
5
110
39
15
15
29
1.88
34648--34688
21
2.1
19
86
9
55
26
7
0
65
1.18
38116--38181
21
3.2
19
74
16
60
39
1
4
54
1.30
40671--40761
47
2.0
47
93
4
159
13
10
15
60
1.59
43584--43625
16
2.7
16
77
3
50
38
4
2
54
1.34
56466--57078
135
4.6
136
87
4
890
33
17
22
26
1.96
58249--58279
2
15.5
2
100
0
62
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58943--58973
14
2.1
15
94
5
55
45
0
0
54
0.99
68967--69069
43
2.4
44
81
4
129
31
26
15
27
1.96
70676--70712
19
1.9
19
89
10
58
18
32
32
16
1.93
72445--72498
22
2.5
22
100
0
108
33
14
31
20
1.93
73018--73067
23
2.2
23
81
0
55
20
18
28
34
1.95
73034--73123
24
3.8
24
77
7
85
23
22
22
32
1.98

Tables:   1

The End!