Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002290.1 Hibiscus syriacus cultivar Beakdansim tig00004657_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39603

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2318--2372
5
10.8
5
92
2
65
5
40
36
18
1.74
2364--2423
6
10.2
6
92
3
86
3
18
48
30
1.64
8236--8298
6
11.2
6
83
13
71
4
17
47
30
1.68
8264--8295
15
2.1
15
94
0
55
3
18
46
31
1.65
14130--14178
5
9.8
5
93
0
62
6
40
36
16
1.73
14176--14236
6
10.2
6
96
0
95
4
16
49
29
1.66
19959--20001
20
2.2
19
83
8
50
67
0
6
25
1.15
25884--25933
3
17.0
3
95
4
93
66
0
0
34
0.92
26386--27216
218
3.8
217
91
1
1315
31
19
17
31
1.95
27882--27973
22
4.1
22
75
8
78
40
10
13
35
1.79
27931--27980
22
2.3
22
92
0
82
36
12
12
40
1.79
32567--32650
42
2.0
42
83
4
107
19
20
13
47
1.82
32927--32972
21
2.2
21
84
0
56
60
6
13
19
1.54
33540--33611
36
2.0
36
94
0
126
27
11
19
41
1.85
36667--36746
3
27.0
3
76
12
76
61
1
0
37
1.04
36667--36736
19
3.4
20
78
11
79
58
1
0
40
1.07

Tables:   1

The End!