Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002296.1 Hibiscus syriacus cultivar Beakdansim tig00004669_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48912

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16993--17045
21
2.5
21
82
14
65
18
22
0
58
1.39
20616--20665
11
4.5
11
76
18
50
76
14
10
0
1.03
20624--20656
13
2.7
12
90
9
57
75
12
12
0
1.04
26187--26226
21
2.0
20
85
9
55
30
2
15
52
1.55
26216--26315
42
2.3
47
78
16
117
34
2
14
50
1.54
26221--26319
43
2.2
47
81
15
120
34
2
14
49
1.54
31576--31607
12
2.4
14
90
10
50
62
0
0
37
0.95
33762--33830
20
3.5
19
94
5
120
26
26
20
27
1.99
33762--33843
39
2.1
40
90
2
130
25
25
21
26
2.00
40342--40438
18
5.5
18
83
4
119
30
12
14
42
1.82
40325--40438
35
3.3
35
86
4
151
31
14
13
41
1.83
40321--40438
17
6.7
18
82
7
136
31
13
12
42
1.82
40933--40975
20
2.2
20
83
8
52
18
4
6
69
1.29
43125--43166
19
2.0
20
86
13
59
47
4
2
45
1.36

Tables:   1

The End!