Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002299.1 Hibiscus syriacus cultivar Beakdansim tig00004678_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77905

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2006--2257
45
5.6
45
90
0
398
25
25
10
38
1.87
2663--2730
19
3.5
20
78
13
79
29
25
16
29
1.96
3227--3259
16
2.1
16
100
0
66
24
33
6
36
1.80
14917--14995
26
3.0
26
96
0
140
36
11
20
31
1.88
20726--21016
90
3.2
88
84
8
379
28
23
10
37
1.89
20751--21025
138
2.0
134
82
7
331
27
22
10
39
1.87
20726--21025
45
6.6
45
79
9
324
27
23
11
38
1.88
21463--21506
19
2.3
19
84
0
61
31
22
11
34
1.90
63979--64018
21
1.9
21
85
10
55
32
25
15
27
1.95
64044--64080
19
1.9
19
94
0
65
21
37
16
24
1.93
63999--64209
64
3.3
63
81
5
212
30
25
16
27
1.97
69993--70072
24
3.5
23
75
14
85
23
26
23
26
2.00
72586--72749
64
2.5
64
85
2
220
33
24
15
26
1.95
72586--72793
64
3.2
63
79
6
195
32
25
14
27
1.95
75647--75686
21
1.9
21
90
10
64
35
27
15
22
1.94
75706--75746
17
2.4
17
91
0
64
24
34
17
24
1.96
75647--75809
62
2.5
63
84
6
193
34
23
15
25
1.95
75697--75856
64
2.6
61
81
7
187
31
25
15
28
1.95

Tables:   1

The End!