Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002318.1 Hibiscus syriacus cultivar Beakdansim tig00004721_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72210

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1561--1596
8
4.5
8
96
0
63
41
0
27
30
1.56
5016--5188
44
4.0
44
87
1
258
38
11
22
27
1.89
7500--7556
23
2.4
23
82
2
78
31
12
28
28
1.93
12977--13016
21
1.9
21
85
10
55
45
7
5
42
1.54
20674--20734
30
2.0
30
96
0
113
44
11
13
31
1.79
25453--25488
6
6.0
6
100
0
72
0
16
0
83
0.65
33675--33769
48
2.0
48
97
0
181
35
10
13
40
1.79
37535--37564
13
2.3
13
94
0
51
33
23
10
33
1.88
37536--37693
85
1.9
85
85
2
219
34
19
15
30
1.93
45877--45958
29
2.8
29
92
1
128
32
14
10
41
1.81
50647--50728
29
2.8
29
92
1
128
32
14
10
41
1.81
54622--54708
5
16.8
5
72
23
56
54
3
0
42
1.17
54614--54720
55
2.0
54
83
12
139
53
4
0
42
1.22
54617--54733
7
15.1
7
70
24
60
52
5
0
41
1.23
60154--60187
15
2.3
15
89
0
50
20
5
0
73
1.04
61937--61987
2
26.0
2
86
11
70
47
1
0
50
1.12
61897--62037
73
1.9
73
81
11
173
47
5
1
45
1.35
62284--62545
142
1.8
142
83
1
346
34
14
21
30
1.93
69325--69495
88
2.0
87
92
3
290
38
11
5
44
1.65

Tables:   1

The End!