Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002319.1 Hibiscus syriacus cultivar Beakdansim tig00004722_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53284

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11521--11550
15
2.0
15
93
0
51
83
6
10
0
0.81
14859--15019
64
2.5
63
83
8
175
34
18
21
26
1.96
16189--16278
31
3.0
31
77
11
89
27
18
20
33
1.96
16249--16336
29
3.0
30
83
3
99
17
20
27
35
1.94
20728--20761
16
2.1
17
88
5
52
41
17
2
38
1.65
21416--21465
20
2.5
20
93
3
82
32
30
18
20
1.96
21416--21573
21
7.9
21
69
11
89
36
24
15
23
1.94
21484--21573
42
2.1
42
81
0
108
38
21
14
25
1.91
22317--22386
35
2.0
35
83
5
88
28
25
14
31
1.95
28260--28302
22
2.0
22
86
9
61
23
2
2
72
1.08
36165--36215
14
3.9
14
75
19
56
9
9
23
56
1.61
36160--36234
24
3.1
25
84
7
77
13
12
18
56
1.68
36279--36317
14
2.8
14
92
0
60
38
20
0
41
1.53
36986--37044
10
5.7
10
73
15
57
11
11
18
57
1.64
36998--37048
16
3.3
15
86
5
68
13
9
15
60
1.58
37110--37142
16
2.1
16
100
0
66
6
12
24
57
1.57
47851--47969
24
5.1
24
78
7
113
29
24
23
22
1.99
48595--48646
20
2.6
20
81
0
59
19
25
21
34
1.96

Tables:   1

The End!