Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002328.1 Hibiscus syriacus cultivar Beakdansim tig00004752_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48569

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225--301
37
2.1
37
85
4
102
48
1
3
46
1.28
6760--6835
35
2.2
35
90
0
116
38
25
1
35
1.64
7232--7477
128
1.9
128
89
0
384
36
15
12
36
1.85
7404--7450
23
2.1
21
88
7
67
36
14
12
36
1.85
7943--7976
16
2.0
18
88
11
54
64
5
2
26
1.30
19628--19705
2
38.5
2
97
2
147
50
1
0
48
1.09
20747--20813
34
1.9
35
87
6
100
40
11
8
38
1.74
21049--21125
23
3.2
23
72
19
68
49
0
3
46
1.20
21131--21211
19
4.3
19
72
20
64
48
1
1
49
1.17
22569--22645
37
2.1
37
85
4
102
48
1
3
46
1.28
29182--29257
35
2.2
35
90
0
116
38
25
1
35
1.64
29654--29901
130
1.9
130
89
0
388
36
14
12
36
1.85
29828--29874
23
2.1
21
88
7
67
36
14
12
36
1.85
29668--29932
130
2.0
129
78
4
273
39
13
12
34
1.82
30226--30289
28
2.2
28
81
10
76
46
1
3
48
1.27
30376--30409
16
2.0
18
88
11
54
64
5
2
26
1.30
42093--42166
2
36.5
2
97
2
139
50
1
0
48
1.09
43208--43274
34
1.9
35
87
6
100
40
11
8
38
1.74
43464--43528
33
2.1
32
83
11
82
49
0
4
46
1.22
43515--43591
23
3.2
23
72
19
68
49
0
3
46
1.20
43597--43677
19
4.3
19
72
20
64
48
1
1
49
1.17
43729--43781
23
2.3
23
77
6
63
43
0
5
50
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45042--45118
37
2.1
37
85
4
102
48
1
3
46
1.28

Tables:   1

The End!