Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002329.1 Hibiscus syriacus cultivar Beakdansim tig00004754_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74827

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4745--4792
16
2.9
16
76
17
53
33
0
2
64
1.05
18079--18109
16
1.9
16
93
0
53
12
38
22
25
1.90
18204--18235
6
5.3
6
96
0
55
68
3
0
28
1.04
18344--18579
120
2.0
119
93
0
400
33
13
16
36
1.88
18615--18778
59
2.8
59
81
6
190
31
21
5
42
1.75
26659--26692
2
17.0
2
100
0
68
50
0
0
50
1.00
31197--31222
13
2.0
13
100
0
52
23
23
7
46
1.78
41404--41987
51
11.0
54
84
6
381
29
26
15
28
1.96
41424--41987
102
5.3
110
86
5
434
29
26
15
28
1.96
41540--41995
51
8.7
51
89
4
610
28
27
14
28
1.96
43311--43391
26
3.2
27
73
21
77
3
23
1
71
1.09
43328--43382
21
2.8
19
78
21
69
3
25
1
69
1.15
53088--53184
44
2.1
47
88
7
146
40
20
11
27
1.87
57202--57418
36
6.1
36
88
4
323
17
24
19
37
1.94
57202--57418
72
3.0
71
95
0
380
17
24
19
37
1.94
61219--61297
19
3.8
19
75
18
77
32
6
29
31
1.82
61217--61304
19
4.3
21
76
16
62
35
5
28
30
1.80
61269--61305
19
1.9
19
94
0
65
40
5
27
27
1.78
68792--68819
2
14.0
2
100
0
56
50
0
0
50
1.00
71707--71752
17
2.6
17
83
12
58
50
8
4
36
1.53
71950--71989
21
1.9
21
100
0
80
30
10
17
42
1.82
72653--72698
21
2.2
21
88
0
65
34
8
28
28
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73883--73926
15
2.9
16
86
10
65
20
6
31
40
1.79

Tables:   1

The End!