Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002331.1 Hibiscus syriacus cultivar Beakdansim tig00004761_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57554

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6661--6685
2
12.5
2
100
0
50
48
0
0
52
1.00
8328--8367
20
2.0
20
90
9
64
45
10
10
35
1.71
13233--13282
15
3.0
17
80
14
59
62
0
0
38
0.96
13235--13276
22
2.0
22
90
4
68
59
0
0
40
0.97
30800--31049
124
2.0
124
91
0
401
27
21
20
31
1.98
32098--32144
21
2.2
21
85
7
60
65
10
8
14
1.45
33695--33737
19
2.3
19
92
4
70
60
2
0
37
1.10
35288--35362
38
2.0
37
82
10
91
46
4
2
46
1.35
38847--38905
24
2.5
24
81
10
70
42
1
0
55
1.09
38929--38986
17
3.2
17
77
22
64
43
0
1
55
1.10
39176--39289
42
2.7
42
97
0
210
45
20
17
16
1.85
39426--39496
15
4.8
15
74
19
60
54
1
2
40
1.23
47891--47933
22
1.9
23
81
13
54
30
13
11
44
1.80
52227--52272
22
2.1
21
92
4
74
28
17
17
36
1.92
56987--57057
19
3.8
19
81
3
90
29
18
30
21
1.97

Tables:   1

The End!