Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002332.1 Hibiscus syriacus cultivar Beakdansim tig00004766_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63162

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1159--1323
64
2.6
62
79
11
154
30
23
16
29
1.96
1231--1365
64
2.1
64
81
13
154
31
22
16
28
1.96
8987--9029
21
2.0
22
86
4
61
11
2
30
55
1.48
9658--9820
65
2.5
64
81
7
168
30
22
16
30
1.96
12059--12094
18
2.0
18
88
0
54
27
27
5
38
1.79
16859--16889
2
15.5
2
100
0
62
48
0
0
51
1.00
17852--17882
16
1.9
16
93
0
53
29
0
16
54
1.42
18788--18869
39
2.1
39
97
0
155
40
6
15
37
1.73
21628--21660
6
5.7
6
85
7
50
21
0
0
78
0.75
25868--25895
12
2.3
12
100
0
56
17
0
0
82
0.68
26152--26182
2
15.5
2
93
0
53
48
0
0
51
1.00
27385--27544
39
4.1
39
97
0
284
38
6
18
36
1.76
29224--29298
31
2.4
31
84
0
87
24
25
13
37
1.91
35035--35107
37
2.0
37
94
2
130
41
10
9
38
1.73
39473--39498
3
8.7
3
100
0
52
30
0
0
69
0.89
41671--41712
22
2.0
22
86
13
61
47
0
4
47
1.23
41675--41739
32
2.0
32
85
5
87
52
3
1
43
1.26
46458--46505
21
2.3
21
78
7
53
29
14
35
20
1.93
61992--62116
66
1.9
66
94
0
223
31
22
21
24
1.98

Tables:   1

The End!