Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002342.1 Hibiscus syriacus cultivar Beakdansim tig00004780_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46001

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5279--5309
4
7.8
4
92
0
53
48
22
0
29
1.51
5492--5529
18
2.1
19
95
5
69
39
5
0
55
1.23
5630--5677
2
24.5
2
95
4
89
52
0
0
47
1.00
6384--6443
28
2.1
28
84
6
75
61
3
8
26
1.40
13990--14016
2
13.5
2
100
0
54
48
0
0
51
1.00
16538--16590
23
2.2
24
84
15
67
37
9
18
33
1.83
24244--24369
58
2.2
59
86
2
175
26
19
8
45
1.79
27430--27456
2
13.5
2
100
0
54
51
0
48
0
1.00
30061--30101
2
20.5
2
100
0
82
51
0
0
48
1.00
30079--30205
53
2.4
53
85
1
155
49
3
9
37
1.51
30189--30235
22
2.1
22
84
7
60
44
0
4
51
1.21
39125--39182
20
2.8
20
85
10
82
60
0
3
36
1.14
39491--39541
18
2.9
18
91
2
77
37
7
27
27
1.84
40086--40475
185
2.1
184
91
2
622
42
3
8
45
1.50

Tables:   1

The End!