Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002347.1 Hibiscus syriacus cultivar Beakdansim tig00004789_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51412

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1046--1082
4
9.5
4
88
5
58
0
70
0
29
0.88
1049--1080
15
2.1
15
94
0
55
0
71
0
28
0.86
1046--1082
19
1.9
19
94
0
65
0
70
0
29
0.88
2166--2212
21
2.2
21
96
0
85
29
12
19
38
1.89
2975--3046
21
3.3
22
75
14
60
19
22
25
33
1.97
12491--12559
23
3.0
23
79
8
77
34
26
21
17
1.95
14165--14326
64
2.5
63
82
4
189
24
22
19
33
1.97
15767--15815
19
2.6
19
100
0
98
32
18
18
30
1.95
17868--17893
13
2.0
13
100
0
52
30
0
7
61
1.24
18136--18231
23
4.3
23
75
16
94
21
19
26
32
1.97
23788--23908
59
2.1
59
93
0
206
35
21
17
25
1.95
28030--28143
59
1.9
58
89
1
174
36
24
14
24
1.92
31815--31928
57
2.0
57
96
0
210
25
16
21
35
1.94
36940--37163
65
3.4
65
86
2
272
25
20
13
41
1.89
37163--37521
132
2.7
132
81
3
407
24
30
17
26
1.97
37709--37751
3
14.3
3
100
0
86
32
0
0
67
0.91
38174--38213
20
2.0
21
85
5
55
25
10
5
60
1.49
42257--43059
199
4.1
197
80
3
801
37
5
9
47
1.60
43097--43143
22
2.4
19
77
19
51
51
4
6
38
1.47
43466--43533
21
3.2
21
100
0
136
27
14
19
38
1.91
50768--50817
23
2.2
22
82
3
55
32
20
20
28
1.97

Tables:   1

The End!