Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002351.1 Hibiscus syriacus cultivar Beakdansim tig00004796_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71320

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1029--1114
11
7.8
11
73
10
68
51
23
10
15
1.74
1023--1114
22
4.2
22
82
10
107
51
22
9
16
1.74
1023--1114
33
2.8
33
83
0
121
51
22
9
16
1.74
5889--5917
2
14.5
2
100
0
58
48
0
0
51
1.00
14492--14558
18
3.9
16
74
20
55
65
0
2
31
1.07
14582--14617
16
2.2
16
90
0
54
77
0
2
19
0.88
14584--14626
16
2.7
15
82
7
50
76
2
2
18
1.00
15214--15396
61
2.8
66
86
8
227
57
13
1
28
1.43
17247--17284
20
2.0
20
94
5
69
81
5
0
13
0.85
22862--22898
16
2.4
16
90
4
58
62
0
2
35
1.10
22934--22974
21
1.9
22
90
5
66
75
0
4
19
0.98
23534--23579
21
2.2
20
80
3
56
58
19
0
21
1.39
23527--23661
64
2.1
64
85
8
168
55
16
0
28
1.41
27900--27940
8
5.2
8
82
5
57
34
0
29
36
1.58
28021--28627
128
4.7
128
96
0
1124
20
24
21
33
1.97
29023--29129
34
3.1
34
89
0
160
36
3
4
55
1.39
29653--29721
21
3.3
20
88
6
84
18
26
34
20
1.96
29726--29773
21
2.3
21
88
0
69
20
12
41
25
1.87
31502--31586
32
2.6
32
79
5
89
58
2
0
38
1.11
31502--31577
35
2.3
34
81
6
93
60
1
0
38
1.05
31530--31607
34
2.3
34
80
10
88
64
5
0
30
1.15
33966--34021
28
2.0
28
89
0
85
25
14
26
33
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38121--38190
27
2.6
26
76
10
70
75
2
4
17
1.08
38136--38179
13
3.4
13
87
6
63
75
4
4
15
1.14
38160--38195
19
1.9
18
88
5
54
77
2
5
13
1.05
38879--38912
17
2.1
17
88
5
52
5
11
29
52
1.61
39354--39422
30
2.3
31
87
7
97
44
2
4
47
1.37
39404--39471
29
2.3
29
80
9
77
44
1
5
48
1.36
39450--39710
36
7.3
36
75
13
218
44
7
3
44
1.50
39347--39498
71
2.1
72
80
16
183
44
2
4
48
1.37
39526--39579
27
2.0
27
82
7
65
40
1
5
51
1.36
39450--39584
39
3.5
39
74
14
120
43
4
4
47
1.43
39399--39647
102
2.4
102
91
3
401
44
5
4
45
1.46
39791--39817
2
13.5
2
100
0
54
51
0
0
48
1.00
42997--43036
16
2.5
16
100
0
80
50
30
15
5
1.65
56053--56090
18
2.1
19
90
5
60
84
0
5
10
0.77
57004--57763
55
13.9
55
84
6
854
30
16
25
27
1.97
57465--57626
53
3.1
51
80
10
200
32
19
24
23
1.97
57452--57896
55
8.2
54
72
14
181
30
17
24
27
1.97
58852--58891
16
2.5
16
100
0
80
50
30
15
5
1.65
65247--65382
69
2.0
69
88
0
200
25
13
30
30
1.94
65440--65474
2
17.5
2
93
0
61
45
0
54
0
0.99
66329--66372
22
2.0
22
90
0
70
56
18
13
11
1.66
66361--66415
22
2.4
23
81
6
76
45
14
21
18
1.85

Tables:   1

The End!