Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002358.1 Hibiscus syriacus cultivar Beakdansim tig00004812_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72794

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4298--4535
132
1.8
131
80
5
291
28
14
23
34
1.94
10179--10212
10
3.5
10
92
4
52
2
32
0
64
1.08
15743--15790
21
2.3
21
96
0
87
27
18
12
41
1.86
20380--20430
21
2.3
22
90
6
77
31
17
5
45
1.72
21348--21424
37
2.1
37
85
4
102
48
1
3
46
1.28
22236--22297
22
3.0
21
80
4
63
45
0
1
53
1.10
28937--28961
8
3.1
8
100
0
50
24
12
36
28
1.91
40914--40945
13
2.4
14
90
10
50
78
0
6
15
0.95
41168--41217
8
6.0
8
88
6
55
52
6
0
42
1.26
41171--41210
2
20.5
2
89
5
64
52
2
0
45
1.14
41171--41217
12
4.1
12
86
8
62
53
4
0
42
1.20
43111--43837
105
6.9
105
94
1
1255
22
18
25
34
1.96
44674--44702
14
2.1
14
100
0
58
13
13
0
72
1.13
55251--55282
13
2.4
14
90
10
50
78
0
6
15
0.95
55507--55550
8
6.0
8
82
17
51
52
6
0
40
1.28
55510--55543
2
17.5
2
87
6
52
52
2
0
44
1.16
55510--55550
10
4.3
10
84
9
50
53
4
0
41
1.22
57173--57756
192
3.0
188
79
6
584
47
8
9
35
1.66
64418--64464
20
2.4
19
82
10
67
53
10
17
19
1.72
64024--64497
181
2.6
183
91
0
763
41
14
16
26
1.87
66704--66768
21
3.1
21
93
0
103
41
10
30
16
1.83
66802--66867
33
2.0
33
90
0
105
31
0
45
22
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67055--67127
33
2.2
33
92
0
119
53
1
41
4
1.28
68689--68737
19
2.6
19
96
0
89
32
2
10
55
1.45
68964--70345
200
6.9
200
94
1
2323
36
14
17
31
1.90
68964--70345
399
3.5
398
93
1
2358
36
14
17
31
1.90

Tables:   1

The End!