Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002363.1 Hibiscus syriacus cultivar Beakdansim tig00004822_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77284

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23786--23836
14
3.5
14
76
13
50
50
0
1
47
1.12
29512--29576
27
2.4
27
86
0
103
10
21
41
26
1.86
33625--33680
23
2.4
23
90
0
85
50
1
8
39
1.44
36623--36693
24
3.1
24
62
25
62
40
15
7
36
1.74
46664--46741
33
2.4
33
85
8
97
38
0
1
60
1.05
46881--46934
17
3.2
17
72
0
54
31
0
3
64
1.11
48465--48512
21
2.3
21
85
0
60
25
39
12
22
1.89
48516--48609
21
4.5
21
92
5
129
18
35
26
20
1.95
49132--49228
33
2.9
34
85
3
133
55
4
3
37
1.35
49130--49235
34
3.2
33
82
8
133
54
4
2
37
1.36
53749--53805
23
2.5
22
75
8
60
52
1
7
38
1.39
54664--54763
47
2.1
47
100
0
200
47
5
16
32
1.68
54675--54748
22
3.2
22
63
10
58
44
4
20
31
1.70
54949--55011
23
2.8
23
82
2
65
38
3
3
55
1.32
57926--57950
6
4.2
6
100
0
50
16
0
52
32
1.44
62310--62340
2
15.5
2
100
0
62
51
0
48
0
1.00
65795--65903
32
3.5
31
74
12
96
39
1
8
50
1.43
65823--65903
31
2.5
32
78
9
94
41
1
7
49
1.38
65795--65911
31
3.7
31
75
6
74
39
2
7
50
1.45
66709--66791
42
2.0
42
92
0
139
44
2
22
30
1.66

Tables:   1

The End!