Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002367.1 Hibiscus syriacus cultivar Beakdansim tig00004836_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42612

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168--212
22
2.0
22
82
0
54
37
8
13
40
1.76
230--302
23
3.2
23
92
0
119
34
5
21
38
1.77
718--790
23
3.2
23
78
0
83
38
4
19
38
1.71
8--2161
488
4.4
490
93
2
3662
41
7
11
39
1.69
1197--1269
23
3.2
23
88
0
110
34
4
20
41
1.72
1685--1757
23
3.2
23
92
0
119
35
8
19
36
1.81
4532--4584
15
3.7
15
92
5
83
32
24
22
20
1.98
5503--5569
26
2.5
27
78
9
75
43
20
11
23
1.85
8902--8940
2
19.5
2
100
0
78
51
0
0
48
1.00
13542--13598
28
2.1
27
80
9
62
49
1
1
47
1.22
18485--18639
45
3.5
45
72
8
145
21
20
17
40
1.91
18475--18645
89
1.9
89
92
0
288
21
20
17
40
1.92
27028--27075
12
4.0
12
78
5
53
22
16
16
43
1.87
27031--27113
24
3.5
24
81
0
85
25
10
15
48
1.78
30175--30211
14
2.7
14
95
4
67
16
24
24
35
1.95
32669--32775
24
4.5
24
77
9
92
21
8
16
53
1.69
40657--40697
21
2.0
21
95
0
73
34
9
26
29
1.88

Tables:   1

The End!