Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000238.1 Hibiscus syriacus cultivar Beakdansim tig00000412_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61305

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5837--5874
19
2.0
19
89
0
58
31
0
13
55
1.38
6604--6656
21
2.5
22
81
3
63
24
1
0
73
0.93
9546--9574
11
2.5
12
94
5
51
10
0
6
82
0.83
11382--11419
19
2.0
19
89
0
58
31
0
13
55
1.38
11395--11456
32
1.9
32
84
12
83
25
0
11
62
1.28
11354--11568
76
2.9
74
88
3
281
29
0
12
57
1.38
11490--11516
12
2.2
12
100
0
54
48
0
0
51
1.00
12142--12182
11
3.6
11
93
3
64
21
0
0
78
0.76
12212--12295
38
2.2
38
81
6
91
22
4
0
72
1.03
12239--12295
15
3.8
15
75
6
53
22
1
0
75
0.90
21645--21695
17
2.8
18
72
18
52
23
3
1
70
1.14
21876--22187
163
1.9
163
86
4
441
35
10
13
40
1.80
29352--29400
18
2.6
19
81
15
57
30
14
24
30
1.94
32195--32224
14
2.1
14
100
0
60
23
20
13
43
1.86
34583--34621
18
2.2
18
85
0
51
33
28
10
28
1.90
36079--36121
18
2.4
18
80
0
50
32
27
11
27
1.92
39817--39872
14
4.1
13
76
17
51
57
1
0
41
1.09
41495--41529
17
2.1
17
94
0
61
57
0
5
37
1.23
48071--48122
6
9.8
5
80
15
52
75
0
25
0
0.81
48072--48122
11
4.7
11
82
2
59
76
0
23
0
0.79
48071--48122
16
3.2
16
83
5
61
75
0
25
0
0.81
53716--53780
26
2.6
25
82
4
85
36
0
15
47
1.46

Tables:   1

The End!