Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002381.1 Hibiscus syriacus cultivar Beakdansim tig00004866_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57192

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--370
136
2.7
136
89
0
546
20
35
21
21
1.96
6530--6569
21
1.9
21
85
10
55
62
0
30
7
1.23
6570--6708
35
3.9
35
84
3
172
36
19
23
20
1.95
6565--6708
71
2.0
71
91
0
234
38
18
23
19
1.93
26187--26261
38
2.0
38
84
2
98
34
1
4
60
1.24
29411--29466
28
2.0
28
100
0
112
42
0
17
39
1.50
30069--30166
47
2.0
48
88
5
144
41
12
12
33
1.80
34384--34413
13
2.2
14
94
5
53
73
0
3
23
0.98
54151--54246
48
2.0
48
95
0
174
28
20
22
28
1.99
54314--54425
33
3.4
33
83
4
136
30
7
17
44
1.76
54314--54416
34
3.1
34
87
2
136
29
7
18
44
1.77

Tables:   1

The End!