Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002389.1 Hibiscus syriacus cultivar Beakdansim tig00004887_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31788

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6008--6035
6
4.7
6
100
0
56
53
0
46
0
1.00
8820--8884
21
3.2
19
72
12
58
20
20
21
38
1.94
8828--9015
21
9.3
19
66
21
78
20
19
22
38
1.94
8820--9012
42
4.7
42
87
6
263
19
18
22
39
1.92
9553--9632
39
2.1
39
95
0
142
13
25
32
28
1.94
9706--9939
21
10.9
21
67
19
126
37
22
18
21
1.95
9699--9970
42
6.4
42
86
5
368
36
21
19
22
1.95
9901--9996
21
4.7
21
75
12
92
35
22
19
21
1.96
18183--18240
29
2.0
30
93
3
100
17
13
15
53
1.73
18319--18366
25
1.9
25
91
0
78
60
0
0
39
0.97
25601--26098
258
1.9
253
91
4
822
40
16
16
26
1.89

Tables:   1

The End!