Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002396.1 Hibiscus syriacus cultivar Beakdansim tig00004899_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91769

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5004--5029
6
4.3
6
100
0
52
19
34
15
30
1.93
13246--13327
20
4.0
21
80
4
87
26
18
20
34
1.96
13292--13332
21
2.0
21
90
0
64
26
14
26
31
1.95
13769--14101
111
3.0
111
92
0
558
36
6
10
45
1.66
15950--16019
24
2.9
24
91
0
113
34
21
32
11
1.89
32958--33002
22
2.0
22
82
0
54
42
8
0
48
1.34
44079--44110
2
16.5
2
93
6
57
46
0
0
53
1.00
45194--45223
15
2.1
14
93
6
51
26
10
0
63
1.26
45198--45235
15
2.5
15
87
8
51
28
13
2
55
1.51
55354--55435
29
2.8
29
94
1
137
32
14
9
42
1.79
60112--60193
29
2.8
29
94
1
137
32
14
9
42
1.79
67432--67470
20
2.0
19
85
5
51
53
2
0
43
1.14
69041--69129
30
2.9
30
89
1
133
49
5
1
43
1.33
69102--69321
37
5.9
38
72
21
144
46
4
4
44
1.42
69198--69257
29
2.1
29
96
0
111
55
5
3
36
1.38
69855--69901
20
2.5
19
75
6
51
23
23
2
51
1.59
82890--82974
42
2.0
42
90
2
136
42
14
17
25
1.87
85964--86016
23
2.3
23
90
0
79
39
13
28
18
1.88

Tables:   1

The End!