Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002398.1 Hibiscus syriacus cultivar Beakdansim tig00004903_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68129

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10184--10259
30
2.4
33
75
16
81
57
2
11
27
1.47
14030--14066
18
2.1
18
94
0
65
35
0
32
32
1.58
18294--18345
25
2.1
25
82
7
61
32
0
11
55
1.36
22886--22938
23
2.3
23
90
0
79
37
3
1
56
1.28
22934--22968
15
2.3
15
95
0
61
45
2
0
51
1.16
24693--24717
13
1.9
13
100
0
50
48
0
4
48
1.20
25024--25236
113
1.9
113
91
3
349
40
10
18
30
1.85
29182--29217
17
2.1
18
89
5
56
27
38
8
25
1.84
33405--33474
37
1.9
37
91
2
115
47
0
4
48
1.21
36970--37021
21
2.6
21
79
14
65
48
3
0
48
1.20
38248--38479
4
57.8
4
71
18
74
71
0
4
24
1.04
38256--38400
26
5.6
26
74
18
97
74
0
6
19
1.02
38333--38413
11
7.2
11
74
13
58
79
0
2
18
0.85
38305--38444
38
3.6
37
78
12
104
75
0
3
21
0.96
38320--38432
35
3.1
35
80
11
97
74
0
3
22
0.97
38451--38528
2
40.5
2
77
16
67
56
1
1
41
1.15
39586--39675
39
2.4
39
87
7
125
27
8
23
40
1.84
39661--39826
36
4.5
37
82
6
178
38
14
20
26
1.91
39661--39826
73
2.3
73
80
6
201
38
14
20
26
1.91
39894--39966
37
2.0
37
94
0
128
41
13
19
26
1.88
39896--39980
37
2.3
37
84
6
111
44
12
17
24
1.84
39867--40106
102
2.4
102
91
0
381
37
12
18
32
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40015--40193
87
2.1
87
92
2
297
36
12
17
32
1.88
39913--40294
189
2.0
189
84
3
500
39
12
18
30
1.87
40450--40772
106
3.0
106
90
2
472
22
20
23
33
1.97
41350--41439
32
2.8
32
89
0
144
37
18
13
30
1.89
42371--42512
69
2.1
68
88
2
205
24
16
20
38
1.92
42595--42648
11
4.7
11
82
13
65
0
12
3
83
0.78
42573--42648
24
3.1
25
85
7
77
2
14
3
78
1.00
42585--42642
14
4.3
14
77
18
61
0
15
3
81
0.83
42585--42648
24
2.6
25
90
7
96
0
14
4
81
0.85
50377--50412
2
18.0
2
94
0
63
47
0
2
50
1.15
50380--50418
12
3.2
12
92
0
60
41
0
5
53
1.23
50421--50480
30
2.0
30
90
9
95
56
1
6
35
1.35
58071--58130
25
2.4
24
81
8
66
45
1
16
36
1.58
65913--65942
15
1.9
16
93
6
53
50
0
33
16
1.46

Tables:   1

The End!