Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002400.1 Hibiscus syriacus cultivar Beakdansim tig00004910_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74259

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5030--5095
33
2.0
33
100
0
132
27
27
18
27
1.98
8455--8502
22
2.2
22
96
0
87
20
14
0
64
1.28
8430--8488
31
2.0
32
83
12
81
20
13
5
61
1.51
18677--18736
2
30.0
2
100
0
120
50
0
0
50
1.00
18869--18896
11
2.5
11
100
0
56
10
0
7
82
0.85
24080--24139
15
3.9
15
80
4
57
51
1
1
45
1.21
39384--39440
30
1.9
30
100
0
114
26
36
17
19
1.94
39386--39453
30
2.3
30
89
5
102
29
33
19
17
1.95
43701--44203
51
9.6
56
91
3
318
28
26
16
29
1.96
43808--44219
51
8.0
51
94
1
671
27
27
16
29
1.97
43701--44219
102
5.0
102
88
4
673
28
26
15
29
1.96
45359--45413
26
2.2
24
90
6
83
5
20
0
74
1.01
45366--45438
34
2.1
34
80
12
78
5
17
1
75
1.07
45424--45473
17
2.8
18
87
6
66
8
20
0
72
1.10
48957--48988
2
16.0
2
100
0
64
50
0
0
50
1.00
55132--55227
45
2.1
46
86
7
133
38
20
11
29
1.88
59017--59102
26
3.3
25
79
9
68
48
30
0
20
1.50
59040--59108
26
2.6
27
76
19
74
50
28
0
20
1.48
68793--68971
90
2.0
90
89
0
277
34
13
13
38
1.84

Tables:   1

The End!