Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002405.1 Hibiscus syriacus cultivar Beakdansim tig00004922_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100295

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16403--16443
17
2.4
18
76
12
50
41
2
0
56
1.13
28456--28506
15
3.4
15
86
0
66
11
66
13
7
1.43
29638--29668
16
1.9
16
100
0
62
38
6
25
29
1.81
30203--30270
27
2.5
28
82
2
84
44
30
8
16
1.78
30251--30318
29
2.3
30
85
12
88
41
22
7
29
1.80
34722--34747
6
4.3
6
100
0
52
34
0
50
15
1.45
36100--36275
60
2.9
58
80
6
190
30
23
6
40
1.79
36677--36744
19
3.5
20
79
15
72
48
0
1
50
1.10
36680--36718
9
4.1
9
83
9
51
48
0
0
51
1.00
39170--39206
16
2.3
16
90
0
56
45
5
2
45
1.40
44426--44468
21
2.1
20
82
4
50
53
0
2
44
1.13
47214--47244
15
2.1
15
93
0
53
19
16
9
54
1.68
53307--53358
26
2.0
25
85
3
68
50
1
5
42
1.37
66493--66534
8
5.0
8
78
21
50
0
61
0
38
0.96
75992--76039
15
3.2
15
84
0
69
4
54
0
41
1.20
88652--88730
41
1.9
41
100
0
158
40
24
15
20
1.90
90059--90091
17
2.0
16
94
5
57
60
0
0
39
0.97
98300--98360
9
7.1
9
80
14
58
42
0
0
57
0.98
98367--98391
12
2.1
12
100
0
50
0
8
48
44
1.32

Tables:   1

The End!