Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002406.1 Hibiscus syriacus cultivar Beakdansim tig00004924_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73911

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2701--2727
2
13.5
2
100
0
54
48
0
0
51
1.00
3258--3297
20
2.1
19
85
4
53
45
2
0
52
1.14
7728--7767
15
2.6
16
88
4
55
47
27
15
10
1.77
17008--17082
29
2.6
29
86
0
123
37
16
9
37
1.80
25268--25312
18
2.5
19
82
7
58
22
8
2
66
1.30
30824--30876
5
11.6
5
86
8
53
16
0
3
79
0.88
30824--30873
18
2.8
18
85
8
59
16
0
4
80
0.87
31769--31818
20
2.4
22
83
6
59
68
10
12
10
1.41
33062--33129
18
3.8
18
100
0
136
50
16
4
29
1.64
35353--35382
15
2.0
15
100
0
60
13
26
46
13
1.80

Tables:   1

The End!