Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002408.1 Hibiscus syriacus cultivar Beakdansim tig00004926_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49979

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
737--839
51
2.1
47
92
7
170
18
32
12
36
1.88
758--856
51
1.9
51
82
8
121
20
31
16
32
1.94
3829--3879
19
2.7
19
82
11
70
35
0
7
56
1.28
7397--7421
9
2.8
9
100
0
50
16
0
0
84
0.63
12436--12474
2
19.5
2
100
0
78
48
0
0
51
1.00
22848--22893
2
23.0
2
100
0
92
50
0
0
50
1.00
22950--23003
24
2.3
23
78
15
56
55
3
5
35
1.41
23115--23152
17
2.2
17
86
9
51
34
2
7
55
1.43
24754--24803
25
2.0
25
100
0
100
28
20
12
40
1.87
25373--25520
75
2.0
76
93
4
255
53
6
2
37
1.40
26125--26175
21
2.4
21
86
0
75
21
5
5
66
1.35
28105--28172
33
2.2
32
81
7
77
42
0
1
55
1.08
32670--32711
21
2.0
21
85
0
57
50
0
0
50
1.00
38039--38106
22
2.9
22
74
18
66
73
2
2
20
1.09
38042--38106
26
2.8
22
74
9
58
73
3
3
20
1.10
38044--38110
25
2.8
25
76
13
68
71
2
2
22
1.13
38054--38142
36
2.5
35
76
16
87
69
2
4
23
1.18
38145--38394
95
2.6
95
86
3
340
32
17
16
33
1.92
45517--45614
44
2.1
47
90
7
157
28
10
21
39
1.86

Tables:   1

The End!