Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002409.1 Hibiscus syriacus cultivar Beakdansim tig00004927_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41442

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6223--6282
23
2.6
25
89
7
83
56
16
11
15
1.67
6256--6292
10
3.7
10
92
0
56
54
24
10
10
1.67
6278--6307
14
2.1
14
93
0
51
46
26
16
10
1.78
6236--6306
34
2.1
34
86
2
99
53
21
12
12
1.71
18844--18888
2
22.5
2
100
0
90
48
0
0
51
1.00
20012--20043
3
10.7
3
100
0
64
34
0
0
65
0.93
22953--22987
14
2.6
14
90
4
54
42
0
5
51
1.25
23256--23309
23
2.4
22
84
6
63
40
1
1
55
1.21
23422--23520
27
3.6
29
70
19
86
49
1
2
47
1.19
23480--23526
22
2.1
23
88
4
69
53
0
2
44
1.12
23488--23531
22
2.0
22
82
8
54
54
0
2
43
1.12
26316--26366
23
2.3
22
80
6
59
39
1
1
56
1.22
35169--35205
19
1.9
19
88
0
56
48
13
21
16
1.80
35164--35240
39
2.0
40
84
2
102
45
11
19
23
1.83
35159--35235
20
3.9
20
79
3
84
42
12
19
24
1.86
35248--35311
20
3.2
20
75
4
58
39
14
17
29
1.88

Tables:   1

The End!