Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000241.1 Hibiscus syriacus cultivar Beakdansim tig00000415_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68541

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2250--2327
40
1.9
41
86
2
113
28
3
20
47
1.67
27029--27142
46
2.5
45
79
13
117
38
6
7
47
1.58
27123--27206
41
2.0
42
86
2
116
26
2
15
55
1.52
27522--27565
2
22.0
2
100
0
88
50
0
0
50
1.00
32976--33035
3
20.0
3
96
0
111
65
1
0
33
1.03
33715--33760
21
2.2
21
84
7
58
43
0
6
50
1.28
34113--34173
25
2.4
25
94
2
104
37
34
11
16
1.85
38418--38622
64
3.2
64
82
2
198
33
20
18
27
1.96
39236--39418
31
6.0
31
91
5
286
20
19
21
38
1.93
42991--43195
64
3.2
64
83
2
216
33
20
18
28
1.96
43804--43990
31
6.0
31
94
1
322
20
19
21
38
1.93
54883--54950
2
34.0
2
77
11
50
44
0
2
52
1.16
54858--54928
33
2.2
30
85
12
88
43
0
4
52
1.20
54892--55036
22
6.6
22
82
11
172
41
1
4
52
1.31
54797--54992
102
2.0
95
88
6
284
42
0
5
51
1.27
56087--56130
20
2.2
20
95
0
79
34
2
25
38
1.68
56437--56477
20
2.0
21
90
4
66
12
21
0
65
1.25
56437--56483
20
2.2
22
85
11
62
10
23
2
63
1.37
57605--57754
77
1.9
77
86
7
216
39
12
4
44
1.62
58857--58910
10
5.2
10
78
14
56
75
0
5
18
0.98
58855--58905
21
2.4
21
80
12
59
74
0
5
19
1.02
58870--58901
9
3.8
9
88
12
50
75
0
6
18
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62764--62797
13
2.6
13
95
0
59
76
0
11
11
1.02
62929--62960
3
11.0
3
93
6
57
68
0
0
31
0.90
66161--66285
65
1.9
65
82
6
155
33
21
17
27
1.96
66190--66349
65
2.5
65
83
6
191
31
24
16
26
1.96
66321--66365
19
2.4
18
85
10
56
26
24
20
28
1.99

Tables:   1

The End!