Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002415.1 Hibiscus syriacus cultivar Beakdansim tig00004937_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76267

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6184--6308
31
4.0
32
77
11
132
31
20
19
28
1.97
6619--6662
22
2.0
23
86
4
63
31
11
2
54
1.48
8291--8339
19
2.7
17
84
9
53
26
20
28
24
1.99
8291--8470
65
2.8
65
81
9
217
27
19
24
28
1.99
8421--8459
19
2.1
19
95
0
69
28
15
30
25
1.96
8311--8512
65
3.1
65
79
11
218
26
18
24
30
1.98
14944--14988
21
2.1
22
87
4
65
33
4
0
62
1.15
15860--15942
30
2.8
30
75
3
78
49
8
9
32
1.66
21581--21620
20
2.0
20
95
4
73
30
10
10
50
1.69
21961--22031
37
1.9
37
91
0
115
45
9
14
30
1.77
22115--22157
13
3.3
13
78
12
52
37
4
6
51
1.50
25208--25303
30
3.2
30
92
1
158
32
27
19
20
1.97
30516--30568
17
2.9
18
86
8
72
45
0
0
54
0.99
32975--33023
23
2.1
23
85
7
64
59
12
2
26
1.44
35348--35389
14
3.0
14
80
13
50
78
4
2
14
1.01
39774--39823
24
2.1
24
85
3
66
26
20
16
38
1.92
42263--42326
32
2.0
32
84
0
83
18
10
29
40
1.85
43129--43163
3
11.7
3
100
0
70
68
0
0
31
0.90
44900--44925
2
13.0
2
100
0
52
50
0
0
50
1.00
63623--63710
20
4.3
20
76
2
86
34
23
15
26
1.95
63704--63827
20
6.4
20
68
19
102
40
24
16
18
1.91
63704--63782
40
2.0
40
97
0
149
41
25
16
16
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63936--63987
22
2.4
22
96
0
95
19
44
19
17
1.87
64337--64399
20
3.5
20
67
24
66
50
28
12
7
1.68
67795--68008
117
1.8
118
81
7
265
50
7
16
25
1.72
68542--68581
20
2.0
21
85
5
55
40
12
5
42
1.64
71901--71962
23
2.9
21
80
7
72
22
35
24
17
1.95
71944--71983
21
2.0
21
85
5
55
27
37
25
10
1.88
73621--73730
34
3.4
34
81
16
162
40
0
26
32
1.56
73633--73722
27
3.1
27
81
18
117
43
0
23
33
1.54

Tables:   1

The End!