Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002419.1 Hibiscus syriacus cultivar Beakdansim tig00004946_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87779

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5155--5271
57
2.0
58
90
1
182
32
9
13
44
1.76
6037--6068
16
2.0
16
93
0
55
46
9
0
43
1.35
17144--17226
41
2.0
41
92
0
139
39
15
9
34
1.80
20315--20401
36
2.4
36
90
0
129
35
21
24
18
1.95
20464--20603
36
3.9
36
82
5
176
37
19
22
20
1.95
36175--36223
25
2.0
25
91
0
80
59
8
2
30
1.38
41037--41099
30
2.1
30
93
0
108
28
4
25
41
1.75
54065--54117
23
2.3
23
74
6
54
41
13
7
37
1.72
54140--54164
4
6.2
4
100
0
50
72
0
28
0
0.86
55802--56098
159
1.9
159
87
1
434
35
10
17
36
1.85
59749--59786
17
2.2
17
86
9
51
65
0
26
7
1.19
64006--64030
8
3.1
8
100
0
50
24
0
12
64
1.27
80309--80361
26
2.0
26
100
0
106
26
11
0
62
1.29
84984--85019
4
8.8
4
90
3
54
75
0
25
0
0.81

Tables:   1

The End!