Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000242.1 Hibiscus syriacus cultivar Beakdansim tig00000426_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43045

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
194--248
2
27.5
2
100
0
110
50
0
0
49
1.00
1203--1564
96
3.8
98
84
6
456
36
14
9
38
1.80
1669--1722
19
2.8
19
82
2
54
44
16
5
33
1.71
1993--2048
20
2.8
20
86
2
78
39
17
8
33
1.81
1993--2044
19
2.7
19
87
3
68
42
17
9
30
1.81
2059--2793
77
9.6
77
77
6
449
37
16
10
36
1.82
2128--2794
154
4.4
152
83
7
741
37
16
10
36
1.82
2128--2795
231
2.9
226
81
6
627
37
16
10
36
1.82
7015--7072
3
19.7
3
89
3
91
36
0
1
62
1.06
20132--20201
33
2.1
32
84
10
88
78
0
12
8
0.96
20106--20193
16
5.3
16
80
14
99
78
1
11
9
1.02
21416--21670
105
2.4
105
85
2
341
39
17
18
24
1.92
28753--28783
15
2.1
15
100
0
62
61
0
12
25
1.32
29071--29459
194
2.0
194
97
0
733
29
11
19
39
1.87
30544--30584
21
1.9
22
95
5
75
41
9
14
34
1.79
33328--33690
130
2.8
129
83
3
424
39
15
10
33
1.83
34804--34851
21
2.3
21
80
16
55
12
8
0
79
0.94
35773--35802
14
2.1
14
93
0
51
60
0
3
36
1.14
35973--37194
134
9.2
134
84
4
1514
28
15
22
33
1.95
35946--37194
401
3.1
398
83
4
1556
28
15
22
33
1.95

Tables:   1

The End!