Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002426.1 Hibiscus syriacus cultivar Beakdansim tig00004964_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62685

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2540--2582
18
2.4
18
100
0
86
20
16
4
58
1.56
6939--7000
32
1.9
32
83
6
81
43
0
19
37
1.51
8120--8160
21
2.0
21
100
0
82
26
24
24
24
2.00
8160--8212
22
2.4
22
90
0
79
24
20
11
43
1.85
9909--9936
2
14.0
2
100
0
56
50
0
0
50
1.00
13478--13538
32
1.9
32
83
6
79
42
0
19
37
1.52
13969--14020
23
2.3
23
96
0
95
17
26
28
26
1.97
14647--14694
21
2.3
21
88
0
78
27
25
22
25
2.00
17794--17844
18
2.7
20
79
14
54
31
13
21
33
1.92
18017--18046
10
3.0
10
90
0
51
23
0
36
40
1.55
25591--25659
23
3.0
23
84
0
84
27
24
26
21
1.99
27864--27960
47
2.1
47
88
1
142
63
8
10
17
1.49
28041--28076
16
2.3
16
90
4
56
72
2
0
25
0.98
30105--30154
23
2.1
24
82
17
61
64
2
2
32
1.16
31254--31297
17
2.6
18
85
10
65
20
4
40
34
1.73
31728--31829
51
2.0
51
100
0
204
27
17
13
41
1.87
32534--32571
14
2.5
16
87
8
53
44
5
0
50
1.24
33272--33384
9
12.4
9
68
23
51
74
3
3
18
1.11
33275--33382
14
7.1
15
69
20
64
75
3
3
17
1.10
33348--33382
7
4.7
7
86
13
52
82
0
0
17
0.66
33272--33384
39
2.8
38
71
20
88
74
3
3
18
1.11
34882--34921
20
2.0
20
100
0
80
50
0
5
45
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36615--36647
7
4.9
7
92
7
59
72
0
0
27
0.85
36616--36645
13
2.3
13
100
0
60
73
0
0
26
0.84
39119--40267
171
6.7
172
87
1
1517
24
18
22
35
1.96
39088--40266
85
13.8
86
86
2
1482
24
18
22
34
1.96
40862--40890
15
1.9
15
100
0
58
24
20
20
34
1.97
41469--41669
99
2.0
98
83
2
251
34
16
14
34
1.90
54921--54998
25
3.2
24
71
12
77
57
20
5
16
1.58
56354--56430
30
2.5
31
89
2
111
23
11
14
50
1.75
57682--57754
31
2.4
31
83
4
85
57
12
9
20
1.62
61479--61541
28
2.2
28
97
0
117
44
7
25
22
1.79

Tables:   1

The End!