Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002432.1 Hibiscus syriacus cultivar Beakdansim tig00004973_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75479

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8140--8180
21
1.9
22
90
5
66
58
0
0
41
0.98
8415--8493
30
2.6
31
72
18
76
46
3
0
49
1.19
8439--8492
11
4.5
12
74
21
51
44
5
0
50
1.25
8818--8998
61
2.9
62
76
5
197
43
6
3
46
1.46
15016--15060
23
2.0
24
86
8
67
31
0
15
53
1.43
18679--18864
91
2.0
92
93
3
322
33
21
21
23
1.97
22222--22256
18
1.9
18
94
0
61
22
34
22
20
1.97
24875--24905
2
15.5
2
100
0
62
48
0
0
51
1.00
27173--27215
21
2.0
21
86
0
59
30
27
25
16
1.97
27195--27346
68
2.2
68
87
3
209
26
26
27
19
1.99
27649--27720
29
2.5
29
90
0
108
37
11
12
38
1.79
27735--27792
30
1.9
30
86
6
82
34
6
24
34
1.82
28012--28078
22
3.0
22
100
0
134
19
26
26
26
1.99
33415--33554
36
3.9
36
88
5
212
36
20
24
18
1.95
37785--37891
36
3.0
36
86
2
153
27
14
15
42
1.87
56350--56392
15
2.8
15
89
3
68
30
25
27
16
1.97
56431--56491
29
2.1
29
96
0
113
36
13
13
37
1.83
64057--64088
7
4.6
7
96
0
55
31
3
15
50
1.60
67636--67684
25
2.0
25
83
0
62
40
16
2
40
1.60
75274--75338
27
2.4
27
87
7
87
36
6
1
55
1.34

Tables:   1

The End!